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Mac Forums - iPod touch -
11 hours and 59 minutes ago
Hi,
My Web Sharing setting on System preferances is "ON"...Yet everytime i try to access my personal
website, i.e. http://localhost/~username , it says "403 Forbidden".
How do i change permissions to access my personal web page?
Also, are there any links to teach me exactly how to execute perl and cgi scripts through the
Apache web server?
Thanks!
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freshmeat.net announcements (Unix) -
23 hours and 51 minutes ago
img src="http://c.fsdn.com/fm/screenshots/2058_thumb.jpg" align="right" alt="Screenshot"
hspace="10" vspace="10" PLT Scheme is a programming language suitable for implementation tasks
ranging from scripting to application development, including GUIs, Web services, etc. It includes
the DrScheme programming environment, a virtual machine with a just-in-time compiler, tools for
creating stand-alone executables, the PLT Scheme Web server, extensive libraries, documentation for
both beginners and experts, and more. It supports the creation of new programming languages through
a rich,expressive syntax system. Example languages include Typed Scheme, ACL2, FrTime, Lazy Scheme,
and ProfessorJ (which is a pedagogical dialect of Java). hr / strongLicense:/strong GNU Lesser
General Public License (LGPL) hr / strongChanges:/strongbr / This is mostly a bugfix release. The
documentation has been rewritten to separate servlet and extension APIs. HTTPS is supported on the
"plt-web-server" command line with "--ssl". Stateless servlets are supported through a 'stateless
interface-version. 'web-server/servlet-env' supports top-level servlets through #:servlet-path.
Servlets are served from anywhere in htdocs. A template system based on the Scribble syntax. Many
other internal modifications to make extension easier. pa
href="http://feedads.googleadservices.com/~a/INptQuWMnAubX8Vn2k1NM1di4Ik/a"img
src="http://feedads.googleadservices.com/~a/INptQuWMnAubX8Vn2k1NM1di4Ik/i" border="0"
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freshmeat.net announcements (Global) -
23 hours and 51 minutes ago
img src="http://c.fsdn.com/fm/screenshots/2058_thumb.jpg" align="right" alt="Screenshot"
hspace="10" vspace="10" PLT Scheme is a programming language suitable for implementation tasks
ranging from scripting to application development, including GUIs, Web services, etc. It includes
the DrScheme programming environment, a virtual machine with a just-in-time compiler, tools for
creating stand-alone executables, the PLT Scheme Web server, extensive libraries, documentation for
both beginners and experts, and more. It supports the creation of new programming languages through
a rich,expressive syntax system. Example languages include Typed Scheme, ACL2, FrTime, Lazy Scheme,
and ProfessorJ (which is a pedagogical dialect of Java). hr / strongLicense:/strong GNU Lesser
General Public License (LGPL) hr / strongChanges:/strongbr / This is mostly a bugfix release. The
documentation has been rewritten to separate servlet and extension APIs. HTTPS is supported on the
"plt-web-server" command line with "--ssl". Stateless servlets are supported through a 'stateless
interface-version. 'web-server/servlet-env' supports top-level servlets through #:servlet-path.
Servlets are served from anywhere in htdocs. A template system based on the Scribble syntax. Many
other internal modifications to make extension easier. pa
href="http://feedads.googleadservices.com/~a/mzkqnUGdI2jYt_vv0Ij_aFp3vrQ/a"img
src="http://feedads.googleadservices.com/~a/mzkqnUGdI2jYt_vv0Ij_aFp3vrQ/i" border="0"
ismap="true"/img/a/pimg
src="http://feedproxy.google.com/~r/freshmeat/feeds/fm-releases-global/~4/ZziwqoCdc9M" height="1"
width="1"/

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Gizmodo -
1 days and 5 hours ago
pobject width="494" height="400"param name="movie"
value="http://www.youtube.com/v/vQL0tqLCjcQhl=enfs=1"/paramparam name="allowFullScreen"
value="true"/paramparam name="allowscriptaccess" value="always"/paramembed
src="http://www.youtube.com/v/vQL0tqLCjcQhl=enfs=1" type="application/x-shockwave-flash"
allowscriptaccess="always" allowfullscreen="true" width="494"
height="400"/embed/objectMercedes-Benz new myCOMAND system has appeared at the a
href="http://jalopnik.com/tag/la-auto-show/"Los Angeles Auto Show/a, taking on the a
href="http://gizmodo.com/5070122/bmw-idrive-40-remixes-xbox-360-and-ipod-into-simpler-control-system"fourth-generation
BMW iDrive/a. Whereas the latter has an Xbox 360 feeling, this one gets some clues from Apple's,
specially Coverflow and the menu navigation, which reminds me of the first version of the Apple TV
and Front Row. One big difference is that myCOMAND is connected to the web, grabbing information
wirelessly and presenting it through their own on-screen apps. Looking at the high resolution
screens and the feature list, it looks very good:/p pscript type="text/javascript"
charset="utf-8"galleryPost('mycomand', 3, '');/script/p p· Off-board navigation: The GPS is
constantly updated, from the maps to the points of interests. It also has a satellite overview and
the search language is open: you can write directions without having to follow a format. It looks
like the are plugging into Google Maps for this one, although I'm not sure how well the writing
will work using their navigation knob./p p· Trip assist: This part is quite nice, grabbing
information pertaining your planned trip from different web sources and presenting it in a useful
manner. You can, for example, see the weather forecast for the trip, as well as giving you the
possibility to make hotel and restaurants reservations from the system itself./p p· World
radio: Instead of using a normal radio, this one plugs into the web to access all the stations
available. The menu gives the possibility to access radio via genre. More interesting is the idea
of storing your music in a web server and accessing it through the system directly, without the
need to connect an digital music player or storing things locally./p p· Internet telephony:
It has support for voice over IP systems like Skype./p p· Web browser: They also include a
web browser, in case you need to get more information than the one provided with the thin clients
above./p p· YouTube: For huh... hmmm. iSome/i reason./p pThe navigation knob, which looks
similar to the a href="http://gizmodo.com/gadgets/notag/powermate-5576.php"Powermate/a, is simpler
than the iDrive 4.0. Our a href="http://jalopnik.com/tag/la-auto-show/"Jalopnik comrades/a will
have to try it to see if their user interface approach is better or not. [a
href="http://www.emercedesbenz.com/Nov08/19_001517_Mercedes_Benz_Debuts_myCOMAND_Internet_Based_Infotainment_System_At_Los_Angeles_Auto_Show.html"Mercedes
Benz/a]/p br style="clear: both;"/ a
href="http://www.pheedo.com/click.phdo?s=86e1f373f34c866416f246fd64fe5ff6p=1"img alt=""
style="border: 0;" border="0"
src="http://www.pheedo.com/img.phdo?s=86e1f373f34c866416f246fd64fe5ff6p=1"//a img
src="http://www.pheedo.com/feeds/tracker.php?i=86e1f373f34c866416f246fd64fe5ff6" style="display:
none;" border="0" height="1" width="1" alt=""/div class="feedflare" a
href="http://feeds.gawker.com/~f/gizmodo/full?a=h7HDN7dU"img
src="http://feedproxy.google.com/~f/gizmodo/full?d=120" border="0"/img/a a
href="http://feeds.gawker.com/~f/gizmodo/full?a=nGkNAEin"img
src="http://feedproxy.google.com/~f/gizmodo/full?d=41" border="0"/img/a a
href="http://feeds.gawker.com/~f/gizmodo/full?a=73nHQO7j"img
src="http://feedproxy.google.com/~f/gizmodo/full?i=73nHQO7j" border="0"/img/a a
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src="http://feedproxy.google.com/~f/gizmodo/full?i=TIXZOHyO" border="0"/img/a /divimg
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freshmeat.net announcements (Unix) -
1 days and 8 hours ago
img src="http://c.fsdn.com/fm/screenshots/63102_thumb.png" align="right" alt="Screenshot"
hspace="10" vspace="10" CacheGuard is a Linux-based OS/appliance dedicated to Web traffic security
and optimization. It transforms an x86-based machine into a powerful Web gateway appliance. It
allows you to control Web traffic for Web surfers and Web servers by acting as a forwarding and
reverse HTTP / HTTPS proxy. It supports HTTP transparent implementation, HTTP compression, Web
caching, URL black- and whitelist guarding, and Web server load balancing. It features a stateful
firewall with NAT and PAT, and a content filtering module blocking malicious HTTP requests like
XSS, SQL and Command Injection. It integrates a caching DNS, a DHCP server, a bandwidth shaper to
manage the QoS, a load sharing system, and an HA (high availability) mode with VRRP and link
bonding. hr / strongLicense:/strong Other/Proprietary License with Free Trial hr /
strongChanges:/strongbr / The bug in the Health Checking module that inadvertently restarted
services has been fixed. Now the "rweb" mode is turned off by default. An option to cancel the
running "apply" operation has been added. The patching module has been completely reviewed. The Web
Auditing GUI has been enhanced. Generic content filtering rules have been updated. The reverse Web
auditing GUI properly displays all warning messages. The reverse Web mode works properly even if
there is only one declared HTTP Web site name. The reverse Web mode works properly even if there is
no DNS declared. pa href="http://feedads.googleadservices.com/~a/cXhmIFuax010y2VuXXshQyhnrWM/a"img
src="http://feedads.googleadservices.com/~a/cXhmIFuax010y2VuXXshQyhnrWM/i" border="0"
ismap="true"/img/a/pimg
src="http://feedproxy.google.com/~r/freshmeat/feeds/fm-releases-unix/~4/1XJDtA5NIRc" height="1"
width="1"/

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freshmeat.net announcements (Global) -
1 days and 8 hours ago
img src="http://c.fsdn.com/fm/screenshots/63102_thumb.png" align="right" alt="Screenshot"
hspace="10" vspace="10" CacheGuard is a Linux-based OS/appliance dedicated to Web traffic security
and optimization. It transforms an x86-based machine into a powerful Web gateway appliance. It
allows you to control Web traffic for Web surfers and Web servers by acting as a forwarding and
reverse HTTP / HTTPS proxy. It supports HTTP transparent implementation, HTTP compression, Web
caching, URL black- and whitelist guarding, and Web server load balancing. It features a stateful
firewall with NAT and PAT, and a content filtering module blocking malicious HTTP requests like
XSS, SQL and Command Injection. It integrates a caching DNS, a DHCP server, a bandwidth shaper to
manage the QoS, a load sharing system, and an HA (high availability) mode with VRRP and link
bonding. hr / strongLicense:/strong Other/Proprietary License with Free Trial hr /
strongChanges:/strongbr / The bug in the Health Checking module that inadvertently restarted
services has been fixed. Now the "rweb" mode is turned off by default. An option to cancel the
running "apply" operation has been added. The patching module has been completely reviewed. The Web
Auditing GUI has been enhanced. Generic content filtering rules have been updated. The reverse Web
auditing GUI properly displays all warning messages. The reverse Web mode works properly even if
there is only one declared HTTP Web site name. The reverse Web mode works properly even if there is
no DNS declared. pa href="http://feedads.googleadservices.com/~a/6S6dMAlKsAxm3BmSh2rSZlrxWzo/a"img
src="http://feedads.googleadservices.com/~a/6S6dMAlKsAxm3BmSh2rSZlrxWzo/i" border="0"
ismap="true"/img/a/pimg
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width="1"/

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Mac Forums - iPod touch -
1 days and 14 hours ago
Ok. Just thought I'd ask. Theoretically I"m guessing that the .mac / .me service is basically a web
server that serves as a gateway for your other macs to see each other. So my question
– Is it possible to set something like this up on a web server? Has
anyone ever looked into this or figured out a way to set it up in OSX?
OrganicPixels
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Mac Forums - iPod touch -
1 days and 14 hours ago
I have an original Xserve G4 1GHz running Panther Server, and I am wondering if anyone knows if it
is possible to upgrade to Tiger client without doing a fresh install?
I know the risks involved and all of that stuff, and I do have a full backup of the installation.
Though Panther Server is installed, the server isn't actually being used as a "mac server" in the
sense that its not a file server or a web server or anything like that. What it is doing is hosting
a very expensive proprietary newspaper subscription management software (of which my company no
longer has the original installation files for). And the company I work for is so small that there
are never more than 10 connections to the xserve anyway.
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Bioinformatics -
1 days and 17 hours ago
Publication Date: 2008 Nov 18 PMID: 19017655br/Authors: Xie, X. - Rigor, P. - Baldi, P.br/Journal:
Bioinformaticsbr/br/MOTIVATION: Achieving a comprehensive map of all the regulatory elements
encoded in the human genome is a fundamental challenge of biomedical research. So far, only a small
fraction of the regulatory elements have been characterized, and there is great interest in
applying computational techniques to systematically discover these elements. Such efforts, however,
have been significantly hindered by the overwhelming size of non-coding DNA regions and the
statistical variability and complex spatial organizations of mammalian regulatory elements.
RESULTS: Here we combine information from multiple mammalian genomes to derive a first fairly
comprehensive map of regulatory elements in the human genome. We develop a procedure for
identifying regulatory sites, with high levels of conservation across different species, using a
new scoring scheme, the Bayesian branch length score (BBLS). Using BBLS, we predict 1.5 million
regulatory sites, corresponding to 380 known regulatory motifs, with an estimated false discovery
rate (FDR) of less than 50%. We demonstrate that the method is particularly effective for 155
motifs, for which 121,056 sites can be mapped with an estimated FDR of less than 10%. Over 28K SNPs
are located in regions overlapping the 1.5 million predicted motif sites, suggesting potential
functional implications for these SNPs. We have deposited these elements in a database and created
a user-friendly Web server for the retrieval, analysis, and visualization of these elements. The
initial map provides a systematic view of gene regulation in the genome, which will be refined as
additional motifs become available. AVAILABILITY: http://motifmap.ics.uci.edu CONTACT:
xhx@ics.uci.edu or pfbaldi@ics.uci.edu.br/br/post to: a href =
http://www.citeulike.org/posturl?url=http%3A%2F%2Fwww.ncbi.nlm.nih.gov%2Fentrez%2Fquery.fcgi%3Fcmd%3DRetrieve%26db%3DPubMed%26dopt%3DAbstract%26list_uids%3D19017655title=Entrez+PubmedCiteULike/a

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Bioinformatics - current issue -
1 days and 20 hours ago
Motivation: The recent advances in metabolomics have created the potential to
measure the levels of hundreds of metabolites which are the end products of cellular regulatory
processes. The automation of the sample acquisition and subsequent analysis in high-throughput
instruments that are capable of measuring metabolites is posing a challenge on the necessary
systematic storage and computational processing of the experimental datasets. Whereas a multitude
of specialized software systems for individual instruments and preprocessing methods exists,
there is clearly a need for a free and platform-independent system that allows the standardized
and integrated storage and analysis of data obtained from metabolomics experiments. Currently
there exists no such system that on the one hand supports preprocessing of raw datasets but also
allows to visualize and integrate the results of higher level statistical analyses within a
functional genomics context.
Results: To facilitate the systematic storage, analysis and integration of
metabolomics experiments, we have implemented MeltDB, a web-based software platform for the
analysis and annotation of datasets from metabolomics experiments. MeltDB supports open file
formats (netCDF, mzXML, mzDATA) and facilitates the integration and evaluation of existing
preprocessing methods. The system provides researchers with means to consistently describe and
store their experimental datasets. Comprehensive analysis and visualization features of
metabolomics datasets are offered to the community through a web-based user interface. The system
covers the process from raw data to the visualization of results in a knowledge-based background
and is integrated into the context of existing software platforms of genomics and transcriptomics
at Bielefeld University. We demonstrate the potential of MeltDB by means of a sample experiment
where we dissect the influence of three different carbon sources on the gram-negative bacterium
Xanthomonas campestris pv. campestris on the level of measured metabolites. Experimental
data are stored, analyzed and annotated within MeltDB and accessible via the public MeltDB web
server.
Availability: The system is publicly available at
http://meltdb.cebitec.uni-bielefeld.de.
Contact: hneuwege@cebitec.uni-bielefeld.de
Supplementary information: Supplementary data are available at
Bioinformatics online.

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Bioinformatics - current issue -
1 days and 20 hours ago
Summary: This article introduces a new forward population genetic simulation
program that can efficiently generate samples from populations with complex demographic histories
under various models of natural selection. The program (SFS_CODE) is highly flexible, allowing
the user to simulate realistic genomic regions with several loci evolving according to a variety
of mutation models (from simple to context-dependent), and allows for insertions and deletions.
Each locus can be annotated as either coding or non-coding, sex-linked or autosomal, selected or
neutral, and have an arbitrary linkage structure (from completely linked to independent).
Availability: The source code (written in the C programming language) is
available at http://sfscode.sourceforge.net, and a web server
(http://cbsuapps.tc.cornell.edu/sfscode.aspx) allows the user to perform simulations using the
high-performance computing cluster hosted by the Cornell University Computational Biology Service
Unit.
Contact: rhernandez@uchicago.edu
Supplementary information: An extensive user's manual, perfor-mance statistics,
and comparisons of patterns of genetic variation generated by SFS_CODE to theoretical
expectations under various non-stationary demographic histories and models of natural selection
are available on the project website: http://sfscode.sourceforge.net.

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